BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E04LP1|AL426221
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1562 0.0
>3x_Contig1770
Length = 29267
Score = 1562 bits (786), Expect = 0.0
Identities = 812/820 (99%), Gaps = 2/820 (0%)
Strand = Plus / Minus
Query: 1 gatcgtgactgcaatcgaaaaagcccaactctctgacttgattcacaagctaccgaagg- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17496 gatcgtgactgcaatcgaaaaagcccaactctctgacttgattcacaagctaccgaaggg 17437
Query: 60 aacagagaccattgtcggtgaaagaggtttgatgatcagtggtggtgagaaacaaaggct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17436 aacagagaccattgtcggtgaaagaggtttgatgatcagtggtggtgagaaacaaaggct 17377
Query: 120 tgccattgcccgtgttttattaaaggataccccaataatgttcttcgatgaagctacaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17376 tgccattgcccgtgttttattaaaggataccccaataatgttcttcgatgaagctacaag 17317
Query: 180 cgcactagatactcatacggagcaatcgctactgaagacaattaaagagaacttctctga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17316 cgcactagatactcatacggagcaatcgctactgaagacaattaaagagaacttctctga 17257
Query: 240 tgtcgccaaaacaagtgtctacatcgcacatagactacggacaatcgctgacgccgataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17256 tgtcgccaaaacaagtgtctacatcgcacatagactacggacaatcgctgacgccgataa 17197
Query: 300 aatcatcgtcttggaaaacggtgcagttagagaagaaggtacccataacgctcttctcgc 359
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 17196 aatcatcgtcttggaaaacggtgcagtaagagaagaaggtacccataacgctcttctcgc 17137
Query: 360 caatccaaactccctgtacagcgaactatggaacatacaagagaacctagacatgctaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17136 caatccaaactccctgtacagcgaactatggaacatacaagagaacctagacatgctaga 17077
Query: 420 ggacgaactcgaagatgaactcaaattagagaaggaaccgagaacttctaagaaggatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17076 ggacgaactcgaagatgaactcaaattagagaaggaaccgagaacttctaagaaggatta 17017
Query: 480 aacgggagattgttaathagtttatacaaaagtwagahaatatcaaatagaaacgagtta 539
||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 17016 aacgggagattgtaaataagtttatacaaaagtaagaaaatatcaaatagaaacgagtta 16957
Query: 540 atgaacaaggtacgcctgactcgagggatatatgtccctctcttaccctttagtgtccca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16956 atgaacaaggtacgcctgactcgagggatatatgtccctctcttaccctttagtgtccca 16897
Query: 600 tctctctagctcatcgcatagctcttatcgaagtcaaaatcacaatttttcactcttcag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16896 tctctctagctcatcgcatagctcttatcgaagtcaaaatcacaatttttcactcttcag 16837
Query: 660 ttataatttgaaaaattaaatgtc-aagggcatcaactcagttcgaagtcatcgcagaac 718
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 16836 taataatttgaaaaattaaatgtcaaagggcatcaactcagttcgaagtcatcgcagaac 16777
Query: 719 attcgaaaagaaataacgaacaggatatgattaataaattatcataggaaagtaagtctt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16776 attcgaaaagaaataacgaacaggatatgattaataaattatcataggaaagtaagtctt 16717
Query: 779 ttcgctctatatacttgttttttagttagatttttactgt 818
||||||||||||||||||||||||||||||||||||||||
Sbjct: 16716 ttcgctctatatacttgttttttagttagatttttactgt 16677
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5632
Number of Sequences: 1807
Number of extensions: 5632
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)